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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs13220395 chr6:26055368 A/G 3.23E-9 509 3.37 33.82 37.73 KM Plot
KIRC rs13220488 chr6:25896907 A/G 4.04E-9 502 37.75 34.82 2.38 KM Plot
KIRC rs1324088 chr6:25841122 C/T 0.000136 509 38.88 33.82 4.23 KM Plot
KIRC rs13329084 chr15:44151063 A/G 6.66E-16 509 1.8 33.25 37.7 KM Plot
KIRC rs13336235 chr16:31370765 G/A 6.55E-5 501 36.9 41.27 10.43 KM Plot
KIRC rs13355707 chr5:109993750 A/G 3.36E-6 509 26.57 25 37.77 KM Plot
KIRC rs1339899 chr6:28271602 T/C 8.67E-5 502 37.6 32.57 9.52 KM Plot
KIRC rs13406863 chr2:109471138 C/G 1.28E-11 508 37.7 27.4 2.3 KM Plot
KIRC rs13408028 chr2:109459001 A/T 8.35E-12 505 37.7 26.3 2.3 KM Plot
KIRC rs13427483 chr2:239588809 A/G 3.83E-5 509 16.17 39.23 37.33 KM Plot
KIRC rs13430225 chr2:109458240 C/T 8.35E-12 505 37.7 26.3 2.3 KM Plot
KIRC rs13430710 chr2:109458531 G/A 8.35E-12 505 37.7 26.3 2.3 KM Plot
KIRC rs134547 chr22:28801009 A/G 1.77E-5 509 37.83 31.5 7.03 KM Plot
KIRC rs1354083 chr3:124359863 A/G 0.000101 509 15.13 41 36.87 KM Plot
KIRC rs1378223 chr4:169168329 A/G 2.09E-8 509 37.33 39.23 3.1 KM Plot